Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 CNN2P2-201ENST00000443536 909 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 CNN2P3-201ENST00000450201 906 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 AC079140.1-201ENST00000508039 487 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 AC087641.1-201ENST00000557561 1021 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 AC091167.2-201ENST00000579581 588 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 AL136317.3-201ENST00000618497 906 ntBASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.77■□□□□ 0.27
FNDC3AQ9Y2H6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 HLA-A-202ENST00000376806 1854 ntBASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 KRT18P32-201ENST00000424695 1287 ntBASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 INGX-202ENST00000489074 768 ntBASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 AP001350.2-201ENST00000625104 1094 ntBASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FNDC3AQ9Y2H6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 LINC00895-201ENST00000629028 1637 ntBASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 FAM58DP-201ENST00000428076 619 ntBASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 RN7SL589P-201ENST00000481268 310 ntBASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
FNDC3AQ9Y2H6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms