Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 AC073439.1-201ENST00000624121 1774 ntBASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 BCRP1-201ENST00000444246 691 ntBASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SPDYE11-202ENST00000450699 704 ntBASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SPDYE9P-201ENST00000570642 692 ntBASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SPDYE10P-202ENST00000612005 668 ntBASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SPDYE8P-202ENST00000612377 668 ntBASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AC079140.1-201ENST00000508039 487 ntBASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AC190387.1-201ENST00000551683 408 ntBASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 AC005622.1-201ENST00000636801 1703 ntBASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CUEDC1Q9NWM3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
CUEDC1Q9NWM3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CUEDC1Q9NWM3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CUEDC1Q9NWM3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CUEDC1Q9NWM3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.84■□□□□ 0.13
CUEDC1Q9NWM3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CUEDC1Q9NWM3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms