Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ACTG1P4-201ENST00000425123 1122 ntBASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 SPDYE13P-201ENST00000445314 798 ntBASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 VENTXP7-201ENST00000475503 772 ntBASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 DUX4L17-201ENST00000557360 1267 ntBASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 GGT3P-204ENST00000453783 1664 ntBASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 FAM45BP-202ENST00000592932 1624 ntBASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.02□□□□□ -0.64
SND1-IT1Q9HBX3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AK4P3-201ENST00000418260 669 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AL596275.1-201ENST00000423464 877 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC246785.2-201ENST00000432512 513 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 SIGLEC30P-201ENST00000455569 941 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC011467.2-201ENST00000598425 242 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC083849.1-201ENST00000615227 514 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AL139011.1-202ENST00000642063 584 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 AC097637.2-201ENST00000624096 1997 ntBASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SND1-IT1Q9HBX3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms