Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 AC105020.1-201ENST00000435356 2205 ntBASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 TARDBPP1-201ENST00000442013 1203 ntBASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 FAM86LP-201ENST00000478302 853 ntBASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDH11XQ9BZA7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 KLF2P4-201ENST00000451959 1225 ntBASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 TDH-203ENST00000531764 1110 ntBASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 AL359711.2-201ENST00000563105 872 ntBASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 AL606495.2-201ENST00000605867 535 ntBASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 AL022328.1-201ENST00000610050 478 ntBASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11XQ9BZA7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 AC124283.3-201ENST00000570869 594 ntBASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11XQ9BZA7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms