Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BBS4Q96RK4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BBS4Q96RK4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BBS4Q96RK4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BBS4Q96RK4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BBS4Q96RK4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.57■□□□□ 0.08
BBS4Q96RK4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.57■□□□□ 0.08
BBS4Q96RK4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.57■□□□□ 0.08
BBS4Q96RK4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BBS4Q96RK4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BBS4Q96RK4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BBS4Q96RK4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 MIR600HG-201ENST00000449175 5984 ntBASIC15.56■□□□□ 0.08
BBS4Q96RK4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 RNA5SP416-201ENST00000516838 111 ntBASIC15.56■□□□□ 0.08
BBS4Q96RK4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 KRT19P2-202ENST00000557173 1012 ntBASIC15.56■□□□□ 0.08
BBS4Q96RK4 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 AC006449.6-201ENST00000612330 2296 ntBASIC15.56■□□□□ 0.08
BBS4Q96RK4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
BBS4Q96RK4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BBS4Q96RK4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 AC005622.1-201ENST00000636801 1703 ntBASIC15.55■□□□□ 0.08
BBS4Q96RK4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 KRT18P2-201ENST00000447938 1258 ntBASIC15.55■□□□□ 0.08
BBS4Q96RK4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 AL009183.1-201ENST00000603760 355 ntBASIC15.55■□□□□ 0.08
BBS4Q96RK4 AC027601.4-201ENST00000611259 610 ntBASIC15.55■□□□□ 0.08
BBS4Q96RK4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms