Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 AL662844.1-201ENST00000546340 181 ntBASIC14.75□□□□□ -0.05
PTP4A1Q93096 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 AC008667.4-201ENST00000607370 168 ntBASIC14.75□□□□□ -0.05
PTP4A1Q93096 AL773604.1-201ENST00000617417 272 ntBASIC14.75□□□□□ -0.05
PTP4A1Q93096 PGM5P2-202ENST00000637225 1043 ntBASIC14.75□□□□□ -0.05
PTP4A1Q93096 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 FER1L4-210ENST00000615531 5998 ntBASIC14.75□□□□□ -0.05
PTP4A1Q93096 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.75□□□□□ -0.05
PTP4A1Q93096 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A1Q93096 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A1Q93096 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 DBET-201ENST00000630918 3363 ntBASIC14.74□□□□□ -0.05
PTP4A1Q93096 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 MIR648-201ENST00000385046 94 ntBASIC14.74□□□□□ -0.05
PTP4A1Q93096 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 HNRNPDP1-201ENST00000439535 754 ntBASIC14.74□□□□□ -0.05
PTP4A1Q93096 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 AC105339.3-201ENST00000560043 636 ntBASIC14.74□□□□□ -0.05
PTP4A1Q93096 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 AC008735.5-201ENST00000623544 497 ntBASIC14.74□□□□□ -0.05
PTP4A1Q93096 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A1Q93096 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.74□□□□□ -0.05
PTP4A1Q93096 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC073347.1-201ENST00000421633 2643 ntBASIC14.73□□□□□ -0.05
PTP4A1Q93096 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC022532.1-201ENST00000624563 1728 ntBASIC14.73□□□□□ -0.05
PTP4A1Q93096 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC093909.1-201ENST00000504731 1122 ntBASIC14.73□□□□□ -0.05
PTP4A1Q93096 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC136632.2-201ENST00000512891 861 ntBASIC14.73□□□□□ -0.05
PTP4A1Q93096 IGHV3-65-201ENST00000523210 341 ntBASIC14.73□□□□□ -0.05
PTP4A1Q93096 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 MIR1199-201ENST00000621445 119 ntBASIC14.73□□□□□ -0.05
PTP4A1Q93096 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTP4A1Q93096 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.73□□□□□ -0.05
PTP4A1Q93096 AC016027.1-202ENST00000607927 1699 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms