Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 AC005498.2-205ENST00000593218 784 ntBASIC14.67□□□□□ -0.06
RNF138Q8WVD3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 AC106028.4-201ENST00000614509 607 ntBASIC14.67□□□□□ -0.06
RNF138Q8WVD3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 AC134407.2-201ENST00000625089 1978 ntBASIC14.67□□□□□ -0.06
RNF138Q8WVD3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF138Q8WVD3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 LINC02447-202ENST00000501888 2146 ntBASIC14.66□□□□□ -0.06
RNF138Q8WVD3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 AL844908.2-201ENST00000609461 460 ntBASIC14.66□□□□□ -0.06
RNF138Q8WVD3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 AC024909.3-201ENST00000611513 2257 ntBASIC14.66□□□□□ -0.06
RNF138Q8WVD3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF138Q8WVD3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 AL590560.3-201ENST00000623350 461 ntBASIC14.65□□□□□ -0.06
RNF138Q8WVD3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 AC100757.3-201ENST00000622361 1406 ntBASIC14.65□□□□□ -0.06
RNF138Q8WVD3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 AC087499.5-201ENST00000452760 1342 ntBASIC14.65□□□□□ -0.06
RNF138Q8WVD3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF138Q8WVD3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms