Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 AC004408.2-201ENST00000623613 2777 ntBASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 AC005622.1-201ENST00000636801 1703 ntBASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
COL22A1Q8NFW1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL22A1Q8NFW1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL22A1Q8NFW1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL22A1Q8NFW1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL22A1Q8NFW1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 AC007274.2-201ENST00000421675 662 ntBASIC21.33■■□□□ 1
COL22A1Q8NFW1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.33■■□□□ 1
COL22A1Q8NFW1 AC087289.5-201ENST00000586076 3175 ntBASIC21.32■■□□□ 1
COL22A1Q8NFW1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.32■■□□□ 1
COL22A1Q8NFW1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 FGFR3P5-201ENST00000564496 886 ntBASIC21.32■■□□□ 1
COL22A1Q8NFW1 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.32■■□□□ 1
COL22A1Q8NFW1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL22A1Q8NFW1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 AP001582.1-201ENST00000525856 295 ntBASIC21.31■■□□□ 1
COL22A1Q8NFW1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 AC145423.3-201ENST00000615987 467 ntBASIC21.31■■□□□ 1
COL22A1Q8NFW1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 BNIP3P1-202ENST00000550043 1585 ntBASIC21.31■■□□□ 1
COL22A1Q8NFW1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 LETM1P2-201ENST00000597330 2178 ntBASIC21.31■■□□□ 1
COL22A1Q8NFW1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL22A1Q8NFW1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.31■■□□□ 1
COL22A1Q8NFW1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL22A1Q8NFW1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 CYP46A4P-201ENST00000414953 267 ntBASIC21.3■■□□□ 1
COL22A1Q8NFW1 AL355334.1-201ENST00000417713 215 ntBASIC21.3■■□□□ 1
COL22A1Q8NFW1 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.3■■□□□ 1
COL22A1Q8NFW1 SPTLC1P5-201ENST00000450718 252 ntBASIC21.3■■□□□ 1
COL22A1Q8NFW1 AC044849.1-201ENST00000519737 1188 ntBASIC21.3■■□□□ 1
COL22A1Q8NFW1 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms