Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 AL596087.1-201ENST00000400979 1969 ntBASIC16.93■□□□□ 0.3
SCML4Q8N228 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.92■□□□□ 0.3
SCML4Q8N228 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SCML4Q8N228 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
SCML4Q8N228 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.92■□□□□ 0.3
SCML4Q8N228 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.92■□□□□ 0.3
SCML4Q8N228 AC243562.2-201ENST00000561247 970 ntBASIC16.92■□□□□ 0.3
SCML4Q8N228 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.92■□□□□ 0.3
SCML4Q8N228 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SCML4Q8N228 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SCML4Q8N228 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SCML4Q8N228 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.92■□□□□ 0.3
SCML4Q8N228 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SCML4Q8N228 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCML4Q8N228 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.91■□□□□ 0.3
SCML4Q8N228 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.91■□□□□ 0.3
SCML4Q8N228 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 CETN4P-206ENST00000642099 2168 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.91■□□□□ 0.3
SCML4Q8N228 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCML4Q8N228 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.91■□□□□ 0.3
SCML4Q8N228 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SCML4Q8N228 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 AC092580.3-201ENST00000430932 139 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 AC055876.3-201ENST00000431496 288 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SCML4Q8N228 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 DUX4L27-201ENST00000554796 1261 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 AL079307.3-201ENST00000556114 283 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.91■□□□□ 0.3
SCML4Q8N228 AC138649.4-201ENST00000612222 287 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 AC093512.1-201ENST00000617969 520 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCML4Q8N228 AC073592.8-201ENST00000624126 511 ntBASIC16.91■□□□□ 0.3
SCML4Q8N228 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.91■□□□□ 0.3
SCML4Q8N228 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
SCML4Q8N228 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCML4Q8N228 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCML4Q8N228 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 KRT8P12-202ENST00000472924 1397 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 FO538757.1-201ENST00000623083 1397 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 CYP4F24P-201ENST00000586049 1580 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCML4Q8N228 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCML4Q8N228 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.9■□□□□ 0.3
SCML4Q8N228 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms