Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 EEF1DP4-201ENST00000446006 880 ntBASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 AP001063.1-201ENST00000568332 529 ntBASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTF1AQ7RTS3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 BX284668.4-201ENST00000453917 508 ntBASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 AC078819.1-201ENST00000547454 765 ntBASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 AC012085.1-201ENST00000548270 765 ntBASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PTF1AQ7RTS3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTF1AQ7RTS3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTF1AQ7RTS3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTF1AQ7RTS3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 BTBD6P1-201ENST00000412176 1267 ntBASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 TOMM22P5-201ENST00000416399 439 ntBASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 FAM197Y7-201ENST00000432892 766 ntBASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 Z93015.1-201ENST00000451718 390 ntBASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AP006547.1-201ENST00000563435 692 ntBASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.64■□□□□ 0.89
PTF1AQ7RTS3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms