Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 POU5F1P6-201ENST00000466990 990 ntBASIC16.77■□□□□ 0.28
CASC4Q6P4E1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 AL365203.3-201ENST00000609742 2057 ntBASIC16.77■□□□□ 0.27
CASC4Q6P4E1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.77■□□□□ 0.27
CASC4Q6P4E1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 AC024909.3-201ENST00000611513 2257 ntBASIC16.76■□□□□ 0.27
CASC4Q6P4E1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 AC020765.3-201ENST00000613051 740 ntBASIC16.76■□□□□ 0.27
CASC4Q6P4E1 AC148477.8-201ENST00000624298 468 ntBASIC16.76■□□□□ 0.27
CASC4Q6P4E1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CASC4Q6P4E1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.75■□□□□ 0.27
CASC4Q6P4E1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 AC010491.1-201ENST00000563101 2797 ntBASIC16.75■□□□□ 0.27
CASC4Q6P4E1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 AC092910.1-201ENST00000482027 1129 ntBASIC16.75■□□□□ 0.27
CASC4Q6P4E1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms