Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC01144-201ENST00000626198 1710 ntBASIC14.72□□□□□ -0.05
CCDC58Q4VC31 NSUN5P1-202ENST00000421140 1535 ntBASIC14.72□□□□□ -0.05
CCDC58Q4VC31 NSUN5P2-203ENST00000457352 1529 ntBASIC14.72□□□□□ -0.05
CCDC58Q4VC31 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 ABCD1P5-201ENST00000445663 754 ntBASIC14.72□□□□□ -0.05
CCDC58Q4VC31 PRYP5-201ENST00000451909 266 ntBASIC14.72□□□□□ -0.05
CCDC58Q4VC31 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.72□□□□□ -0.05
CCDC58Q4VC31 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 KRT18P1-202ENST00000452408 1331 ntBASIC14.71□□□□□ -0.05
CCDC58Q4VC31 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 MIR4492-201ENST00000581627 80 ntBASIC14.71□□□□□ -0.05
CCDC58Q4VC31 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.71□□□□□ -0.05
CCDC58Q4VC31 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CCDC58Q4VC31 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.06
CCDC58Q4VC31 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms