Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC02447-202ENST00000501888 2146 ntBASIC14.79□□□□□ -0.04
RPS4XP62701 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.79□□□□□ -0.04
RPS4XP62701 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.79□□□□□ -0.04
RPS4XP62701 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.79□□□□□ -0.04
RPS4XP62701 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.79□□□□□ -0.04
RPS4XP62701 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS4XP62701 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.79□□□□□ -0.04
RPS4XP62701 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.79□□□□□ -0.04
RPS4XP62701 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.79□□□□□ -0.04
RPS4XP62701 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RPS4XP62701 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.79□□□□□ -0.04
RPS4XP62701 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.79□□□□□ -0.04
RPS4XP62701 AL078644.1-201ENST00000609881 752 ntBASIC14.79□□□□□ -0.04
RPS4XP62701 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RPS4XP62701 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RPS4XP62701 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RPS4XP62701 AL513190.1-201ENST00000621254 727 ntBASIC14.79□□□□□ -0.04
RPS4XP62701 AC112504.1-201ENST00000623415 1841 ntBASIC14.79□□□□□ -0.04
RPS4XP62701 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS4XP62701 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS4XP62701 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPS4XP62701 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS4XP62701 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 AC092919.2-201ENST00000623631 1645 ntBASIC14.78□□□□□ -0.04
RPS4XP62701 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RPS4XP62701 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.78□□□□□ -0.04
RPS4XP62701 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.78□□□□□ -0.04
RPS4XP62701 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RPS4XP62701 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.78□□□□□ -0.04
RPS4XP62701 AL009183.1-201ENST00000603760 355 ntBASIC14.78□□□□□ -0.04
RPS4XP62701 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS4XP62701 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS4XP62701 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS4XP62701 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.77□□□□□ -0.04
RPS4XP62701 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.77□□□□□ -0.04
RPS4XP62701 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RPS4XP62701 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.77□□□□□ -0.04
RPS4XP62701 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RPS4XP62701 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RPS4XP62701 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RPS4XP62701 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.77□□□□□ -0.04
RPS4XP62701 BCAR1-209ENST00000546196 1340 ntBASIC14.77□□□□□ -0.04
RPS4XP62701 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS4XP62701 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
RPS4XP62701 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.77□□□□□ -0.04
RPS4XP62701 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPS4XP62701 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.77□□□□□ -0.05
RPS4XP62701 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPS4XP62701 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPS4XP62701 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RPS4XP62701 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.77□□□□□ -0.05
RPS4XP62701 CNN2P11-201ENST00000429351 262 ntBASIC14.77□□□□□ -0.05
RPS4XP62701 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.77□□□□□ -0.05
RPS4XP62701 AC093724.1-201ENST00000448659 1027 ntBASIC14.77□□□□□ -0.05
RPS4XP62701 CEND1P1-201ENST00000451006 455 ntBASIC14.77□□□□□ -0.05
RPS4XP62701 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
RPS4XP62701 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
RPS4XP62701 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.77□□□□□ -0.05
RPS4XP62701 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.77□□□□□ -0.05
RPS4XP62701 AC007064.4-201ENST00000637740 555 ntBASIC14.77□□□□□ -0.05
RPS4XP62701 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPS4XP62701 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms