Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 TFAMP1-201ENST00000412727 736 ntBASIC15.24■□□□□ 0.03
PER3P56645 SPDYE7P-202ENST00000420373 878 ntBASIC15.24■□□□□ 0.03
PER3P56645 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
PER3P56645 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
PER3P56645 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 AC051619.7-201ENST00000568314 623 ntBASIC15.24■□□□□ 0.03
PER3P56645 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 AL390955.2-201ENST00000603032 514 ntBASIC15.24■□□□□ 0.03
PER3P56645 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.24■□□□□ 0.03
PER3P56645 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
PER3P56645 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.24■□□□□ 0.03
PER3P56645 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PER3P56645 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PER3P56645 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PER3P56645 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.24■□□□□ 0.03
PER3P56645 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PER3P56645 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.24■□□□□ 0.03
PER3P56645 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
PER3P56645 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 AKAP8P1-201ENST00000434743 1349 ntBASIC15.23■□□□□ 0.03
PER3P56645 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.23■□□□□ 0.03
PER3P56645 AC140658.5-201ENST00000438532 169 ntBASIC15.23■□□□□ 0.03
PER3P56645 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.23■□□□□ 0.03
PER3P56645 GAPDHP21-201ENST00000450301 1010 ntBASIC15.23■□□□□ 0.03
PER3P56645 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 IGHV3-62-201ENST00000520057 340 ntBASIC15.23■□□□□ 0.03
PER3P56645 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.23■□□□□ 0.03
PER3P56645 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 ACTL9-202ENST00000612068 1252 ntBASIC15.23■□□□□ 0.03
PER3P56645 AL161645.1-201ENST00000622716 1255 ntBASIC15.23■□□□□ 0.03
PER3P56645 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.23■□□□□ 0.03
PER3P56645 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.23■□□□□ 0.03
PER3P56645 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PER3P56645 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
PER3P56645 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms