Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CDH13P55290 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH13P55290 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
CDH13P55290 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH13P55290 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH13P55290 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH13P55290 CXCL1P1-201ENST00000502804 216 ntBASIC16.05■□□□□ 0.16
CDH13P55290 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH13P55290 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH13P55290 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.05■□□□□ 0.16
CDH13P55290 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDH13P55290 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH13P55290 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH13P55290 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH13P55290 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 RNU1-129P-201ENST00000384064 167 ntBASIC16.04■□□□□ 0.16
CDH13P55290 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.04■□□□□ 0.16
CDH13P55290 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 MIR4751-201ENST00000578027 74 ntBASIC16.04■□□□□ 0.16
CDH13P55290 U1.21-201ENST00000580816 167 ntBASIC16.04■□□□□ 0.16
CDH13P55290 RN7SL510P-201ENST00000581311 263 ntBASIC16.04■□□□□ 0.16
CDH13P55290 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH13P55290 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH13P55290 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH13P55290 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH13P55290 AP002414.2-201ENST00000591780 3365 ntBASIC16.04■□□□□ 0.16
CDH13P55290 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH13P55290 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH13P55290 AP005117.1-202ENST00000581724 1908 ntBASIC16.04■□□□□ 0.16
CDH13P55290 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CDH13P55290 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 DBET-201ENST00000630918 3363 ntBASIC16.03■□□□□ 0.16
CDH13P55290 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms