Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HLA-H-201ENST00000383620 1096 ntBASIC15.88■□□□□ 0.13
PDX1P52945 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PDX1P52945 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 AL596325.1-201ENST00000563991 1082 ntBASIC15.88■□□□□ 0.13
PDX1P52945 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.88■□□□□ 0.13
PDX1P52945 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PDX1P52945 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.87■□□□□ 0.13
PDX1P52945 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PDX1P52945 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PDX1P52945 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PDX1P52945 COX5BP8-201ENST00000416911 349 ntBASIC15.87■□□□□ 0.13
PDX1P52945 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PDX1P52945 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.87■□□□□ 0.13
PDX1P52945 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 AC124067.4-201ENST00000519691 2379 ntBASIC15.87■□□□□ 0.13
PDX1P52945 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.87■□□□□ 0.13
PDX1P52945 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.87■□□□□ 0.13
PDX1P52945 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDX1P52945 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 PCDHA14-201ENST00000506751 2298 ntBASIC15.86■□□□□ 0.13
PDX1P52945 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 AC073439.1-201ENST00000624121 1774 ntBASIC15.86■□□□□ 0.13
PDX1P52945 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PDX1P52945 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.86■□□□□ 0.13
PDX1P52945 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 RN7SL692P-201ENST00000464677 288 ntBASIC15.86■□□□□ 0.13
PDX1P52945 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.86■□□□□ 0.13
PDX1P52945 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 BANF1P1-201ENST00000553684 263 ntBASIC15.86■□□□□ 0.13
PDX1P52945 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PDX1P52945 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 AL844908.2-201ENST00000609461 460 ntBASIC15.86■□□□□ 0.13
PDX1P52945 TEX28P1-201ENST00000613479 1221 ntBASIC15.86■□□□□ 0.13
PDX1P52945 TEX28P2-201ENST00000617764 1221 ntBASIC15.86■□□□□ 0.13
PDX1P52945 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 PCDHB17P-201ENST00000539533 2393 ntBASIC15.86■□□□□ 0.13
PDX1P52945 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PDX1P52945 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms