Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.4■□□□□ 0.22
ARCN1P48444 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.4■□□□□ 0.22
ARCN1P48444 RPSAP43-201ENST00000402237 625 ntBASIC16.4■□□□□ 0.22
ARCN1P48444 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.4■□□□□ 0.22
ARCN1P48444 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.4■□□□□ 0.22
ARCN1P48444 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.4■□□□□ 0.22
ARCN1P48444 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.4■□□□□ 0.22
ARCN1P48444 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.4■□□□□ 0.22
ARCN1P48444 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.4■□□□□ 0.22
ARCN1P48444 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.4■□□□□ 0.22
ARCN1P48444 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
ARCN1P48444 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.4■□□□□ 0.22
ARCN1P48444 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 AC132872.4-202ENST00000622924 2756 ntBASIC16.4■□□□□ 0.22
ARCN1P48444 LINC02447-202ENST00000501888 2146 ntBASIC16.4■□□□□ 0.22
ARCN1P48444 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.4■□□□□ 0.22
ARCN1P48444 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.4■□□□□ 0.22
ARCN1P48444 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARCN1P48444 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 AC016027.1-202ENST00000607927 1699 ntBASIC16.4■□□□□ 0.22
ARCN1P48444 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARCN1P48444 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ARCN1P48444 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
ARCN1P48444 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.39■□□□□ 0.21
ARCN1P48444 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 MIR648-201ENST00000385046 94 ntBASIC16.39■□□□□ 0.21
ARCN1P48444 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 DNAJB3-201ENST00000446806 729 ntBASIC16.39■□□□□ 0.21
ARCN1P48444 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.39■□□□□ 0.21
ARCN1P48444 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.39■□□□□ 0.21
ARCN1P48444 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.39■□□□□ 0.21
ARCN1P48444 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.39■□□□□ 0.21
ARCN1P48444 PDPK2P-202ENST00000562415 1191 ntBASIC16.39■□□□□ 0.21
ARCN1P48444 MIR3687-2-201ENST00000577708 61 ntBASIC16.39■□□□□ 0.21
ARCN1P48444 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.39■□□□□ 0.21
ARCN1P48444 MIR3687-1-201ENST00000614492 61 ntBASIC16.39■□□□□ 0.21
ARCN1P48444 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.39■□□□□ 0.21
ARCN1P48444 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ARCN1P48444 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.39■□□□□ 0.21
ARCN1P48444 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ARCN1P48444 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ARCN1P48444 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ARCN1P48444 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARCN1P48444 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.38■□□□□ 0.21
ARCN1P48444 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ARCN1P48444 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.38■□□□□ 0.21
ARCN1P48444 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.38■□□□□ 0.21
ARCN1P48444 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.38■□□□□ 0.21
ARCN1P48444 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ARCN1P48444 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARCN1P48444 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.38■□□□□ 0.21
ARCN1P48444 RPS8P6-201ENST00000426177 609 ntBASIC16.38■□□□□ 0.21
ARCN1P48444 KRT18P34-201ENST00000488218 1270 ntBASIC16.38■□□□□ 0.21
ARCN1P48444 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
ARCN1P48444 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.38■□□□□ 0.21
ARCN1P48444 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.38■□□□□ 0.21
ARCN1P48444 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms