Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
USP6P35125 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.76■■□□□ 1.07
USP6P35125 SLED1-202ENST00000512051 380 ntBASIC21.76■■□□□ 1.07
USP6P35125 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.76■■□□□ 1.07
USP6P35125 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
USP6P35125 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.76■■□□□ 1.07
USP6P35125 AL359711.2-201ENST00000563105 872 ntBASIC21.76■■□□□ 1.07
USP6P35125 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.76■■□□□ 1.07
USP6P35125 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
USP6P35125 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.76■■□□□ 1.07
USP6P35125 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 INTS4P2-202ENST00000614726 2019 ntBASIC21.76■■□□□ 1.07
USP6P35125 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP6P35125 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.76■■□□□ 1.07
USP6P35125 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 AC136604.1-201ENST00000418535 575 ntBASIC21.75■■□□□ 1.07
USP6P35125 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
USP6P35125 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.75■■□□□ 1.07
USP6P35125 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.75■■□□□ 1.07
USP6P35125 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.75■■□□□ 1.07
USP6P35125 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP6P35125 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
USP6P35125 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.74■■□□□ 1.07
USP6P35125 KRT8P22-201ENST00000562317 1415 ntBASIC21.74■■□□□ 1.07
USP6P35125 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.74■■□□□ 1.07
USP6P35125 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.74■■□□□ 1.07
USP6P35125 KRT43P-201ENST00000434019 910 ntBASIC21.74■■□□□ 1.07
USP6P35125 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.74■■□□□ 1.07
USP6P35125 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
USP6P35125 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.74■■□□□ 1.07
USP6P35125 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.74■■□□□ 1.07
USP6P35125 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.74■■□□□ 1.07
USP6P35125 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 REXO1L6P-201ENST00000603433 1515 ntBASIC21.74■■□□□ 1.07
USP6P35125 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
USP6P35125 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.74■■□□□ 1.07
USP6P35125 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.74■■□□□ 1.07
USP6P35125 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
USP6P35125 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
USP6P35125 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP6P35125 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
USP6P35125 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
USP6P35125 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
USP6P35125 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
USP6P35125 ACTG1P3-201ENST00000431775 1114 ntBASIC21.73■■□□□ 1.07
USP6P35125 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.73■■□□□ 1.07
USP6P35125 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.73■■□□□ 1.07
USP6P35125 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
USP6P35125 AL606495.2-201ENST00000605867 535 ntBASIC21.73■■□□□ 1.07
USP6P35125 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.73■■□□□ 1.07
USP6P35125 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
USP6P35125 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
USP6P35125 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.73■■□□□ 1.07
USP6P35125 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.73■■□□□ 1.07
USP6P35125 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
USP6P35125 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
USP6P35125 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.73■■□□□ 1.07
USP6P35125 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6P35125 AP001282.1-201ENST00000531301 1499 ntBASIC21.73■■□□□ 1.07
USP6P35125 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms