Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.26■□□□□ 0.67
COL4A5P29400 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 MIR663B-201ENST00000408361 115 ntBASIC19.26■□□□□ 0.67
COL4A5P29400 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.26■□□□□ 0.67
COL4A5P29400 AC079316.1-201ENST00000548397 411 ntBASIC19.26■□□□□ 0.67
COL4A5P29400 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 AC091271.1-201ENST00000611877 1162 ntBASIC19.26■□□□□ 0.67
COL4A5P29400 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL4A5P29400 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A5P29400 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.26■□□□□ 0.67
COL4A5P29400 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A5P29400 HLA-A-202ENST00000376806 1854 ntBASIC19.26■□□□□ 0.67
COL4A5P29400 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
COL4A5P29400 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 LINC01144-201ENST00000626198 1710 ntBASIC19.25■□□□□ 0.67
COL4A5P29400 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL4A5P29400 ELK2AP-201ENST00000392510 1007 ntBASIC19.25■□□□□ 0.67
COL4A5P29400 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.25■□□□□ 0.67
COL4A5P29400 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.25■□□□□ 0.67
COL4A5P29400 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
COL4A5P29400 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.25■□□□□ 0.67
COL4A5P29400 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.25■□□□□ 0.67
COL4A5P29400 AC105129.2-201ENST00000559536 390 ntBASIC19.25■□□□□ 0.67
COL4A5P29400 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 AC000095.1-201ENST00000603208 874 ntBASIC19.25■□□□□ 0.67
COL4A5P29400 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.25■□□□□ 0.67
COL4A5P29400 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL4A5P29400 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.25■□□□□ 0.67
COL4A5P29400 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL4A5P29400 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A5P29400 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
COL4A5P29400 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A5P29400 AC139713.2-201ENST00000641328 2723 ntBASIC19.24■□□□□ 0.67
COL4A5P29400 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL4A5P29400 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.24■□□□□ 0.67
COL4A5P29400 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A5P29400 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.24■□□□□ 0.67
COL4A5P29400 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.24■□□□□ 0.67
COL4A5P29400 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.24■□□□□ 0.67
COL4A5P29400 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 AP001063.1-201ENST00000568332 529 ntBASIC19.24■□□□□ 0.67
COL4A5P29400 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.24■□□□□ 0.67
COL4A5P29400 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL4A5P29400 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.24■□□□□ 0.67
COL4A5P29400 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A5P29400 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A5P29400 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL4A5P29400 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
COL4A5P29400 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A5P29400 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.24■□□□□ 0.67
COL4A5P29400 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.24■□□□□ 0.67
COL4A5P29400 AC243562.2-201ENST00000561247 970 ntBASIC19.24■□□□□ 0.67
COL4A5P29400 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.24■□□□□ 0.67
COL4A5P29400 AC009486.1-201ENST00000569860 813 ntBASIC19.24■□□□□ 0.67
COL4A5P29400 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.24■□□□□ 0.67
COL4A5P29400 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms