Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC092384.3-202ENST00000564646 2873 ntBASIC15.37■□□□□ 0.05
CHMP24386 AC006277.1-201ENST00000624348 1610 ntBASIC15.37■□□□□ 0.05
CHMP24386 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP24386 AC004832.2-201ENST00000426397 482 ntBASIC15.37■□□□□ 0.05
CHMP24386 RHOQP3-201ENST00000437982 621 ntBASIC15.37■□□□□ 0.05
CHMP24386 SLC25A6P2-201ENST00000497974 877 ntBASIC15.37■□□□□ 0.05
CHMP24386 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP24386 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP24386 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP24386 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP24386 AL139011.1-202ENST00000642063 584 ntBASIC15.37■□□□□ 0.05
CHMP24386 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP24386 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CHMP24386 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP24386 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP24386 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CHMP24386 AC068418.2-201ENST00000577309 3703 ntBASIC15.37■□□□□ 0.05
CHMP24386 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 AC002310.6-201ENST00000624451 1377 ntBASIC15.36■□□□□ 0.05
CHMP24386 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP24386 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP24386 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.36■□□□□ 0.05
CHMP24386 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.36■□□□□ 0.05
CHMP24386 FAM185BP-201ENST00000443595 716 ntBASIC15.36■□□□□ 0.05
CHMP24386 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.36■□□□□ 0.05
CHMP24386 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP24386 AC013467.2-201ENST00000605472 835 ntBASIC15.36■□□□□ 0.05
CHMP24386 AC007064.4-201ENST00000637740 555 ntBASIC15.36■□□□□ 0.05
CHMP24386 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP24386 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CHMP24386 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP24386 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP24386 AC023824.1-201ENST00000562945 2975 ntBASIC15.36■□□□□ 0.05
CHMP24386 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP24386 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHMP24386 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHMP24386 AL603832.2-201ENST00000566195 2125 ntBASIC15.35■□□□□ 0.05
CHMP24386 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.35■□□□□ 0.05
CHMP24386 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.35■□□□□ 0.05
CHMP24386 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 MIR1233-2-201ENST00000408138 82 ntBASIC15.35■□□□□ 0.05
CHMP24386 MIR1233-1-201ENST00000408722 82 ntBASIC15.35■□□□□ 0.05
CHMP24386 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP24386 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 MIR3687-2-201ENST00000577708 61 ntBASIC15.35■□□□□ 0.05
CHMP24386 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CHMP24386 MTDHP5-201ENST00000598980 586 ntBASIC15.35■□□□□ 0.05
CHMP24386 MIR3687-1-201ENST00000614492 61 ntBASIC15.35■□□□□ 0.05
CHMP24386 AC010507.1-201ENST00000633895 436 ntBASIC15.35■□□□□ 0.05
CHMP24386 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHMP24386 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CHMP24386 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms