Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AC020765.3-201ENST00000613051 740 ntBASIC16.49■□□□□ 0.23
KRT4P19013 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
KRT4P19013 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
KRT4P19013 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT4P19013 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 AL353732.1-201ENST00000569618 1459 ntBASIC16.48■□□□□ 0.23
KRT4P19013 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
KRT4P19013 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT4P19013 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT4P19013 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 PCED1CP-201ENST00000419887 785 ntBASIC16.48■□□□□ 0.23
KRT4P19013 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT4P19013 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 SLC25A6P2-201ENST00000497974 877 ntBASIC16.48■□□□□ 0.23
KRT4P19013 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT4P19013 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT4P19013 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT4P19013 SSR4P1-203ENST00000599569 2260 ntBASIC16.48■□□□□ 0.23
KRT4P19013 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KRT4P19013 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT4P19013 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 LINC02228-204ENST00000642115 2962 ntBASIC16.47■□□□□ 0.23
KRT4P19013 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
KRT4P19013 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 AL592424.1-201ENST00000563624 1536 ntBASIC16.47■□□□□ 0.23
KRT4P19013 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 PTCHD3P3-201ENST00000403073 906 ntBASIC16.47■□□□□ 0.23
KRT4P19013 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT4P19013 AC106795.1-205ENST00000512851 1056 ntBASIC16.47■□□□□ 0.23
KRT4P19013 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT4P19013 AC087641.1-201ENST00000557561 1021 ntBASIC16.47■□□□□ 0.23
KRT4P19013 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KRT4P19013 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 AL139288.1-201ENST00000623748 933 ntBASIC16.47■□□□□ 0.23
KRT4P19013 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 AC023157.3-201ENST00000619086 2088 ntBASIC16.47■□□□□ 0.23
KRT4P19013 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT4P19013 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT4P19013 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT4P19013 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRT4P19013 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
KRT4P19013 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT4P19013 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KRT4P19013 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT4P19013 AC005622.1-201ENST00000636801 1703 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms