Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC01225-203ENST00000563550 1244 ntBASIC16.85■□□□□ 0.29
ERCC2P18074 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 FOXO1B-201ENST00000504678 1527 ntBASIC16.85■□□□□ 0.29
ERCC2P18074 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC2P18074 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC2P18074 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ERCC2P18074 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC2P18074 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.84■□□□□ 0.29
ERCC2P18074 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.84■□□□□ 0.29
ERCC2P18074 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.84■□□□□ 0.29
ERCC2P18074 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC2P18074 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC2P18074 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC2P18074 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC2P18074 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 AC105339.1-204ENST00000636249 355 ntBASIC16.84■□□□□ 0.29
ERCC2P18074 PCDHA1-201ENST00000378133 2726 ntBASIC16.84■□□□□ 0.29
ERCC2P18074 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC2P18074 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ERCC2P18074 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC2P18074 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC2P18074 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ERCC2P18074 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC2P18074 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ERCC2P18074 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
ERCC2P18074 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC2P18074 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ERCC2P18074 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC2P18074 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ERCC2P18074 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC2P18074 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC2P18074 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
ERCC2P18074 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
ERCC2P18074 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.83■□□□□ 0.28
ERCC2P18074 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.83■□□□□ 0.28
ERCC2P18074 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC2P18074 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC2P18074 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC2P18074 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.83■□□□□ 0.28
ERCC2P18074 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.83■□□□□ 0.28
ERCC2P18074 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC2P18074 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC2P18074 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ERCC2P18074 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.82■□□□□ 0.28
ERCC2P18074 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ERCC2P18074 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ERCC2P18074 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ERCC2P18074 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms