Protein–RNA interactions for Protein: P0CF97

FAM200B, Protein FAM200B, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200BP0CF97 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM200BP0CF97 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
FAM200BP0CF97 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
FAM200BP0CF97 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
FAM200BP0CF97 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
FAM200BP0CF97 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FAM200BP0CF97 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM200BP0CF97 C8orf49-201ENST00000525043 1968 ntBASIC17.33■□□□□ 0.37
FAM200BP0CF97 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.33■□□□□ 0.37
FAM200BP0CF97 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM200BP0CF97 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.33■□□□□ 0.37
FAM200BP0CF97 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.33■□□□□ 0.37
FAM200BP0CF97 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FAM200BP0CF97 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM200BP0CF97 PCDH8P1-201ENST00000428983 2773 ntBASIC17.33■□□□□ 0.36
FAM200BP0CF97 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.33■□□□□ 0.36
FAM200BP0CF97 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 AC026150.2-201ENST00000564693 1156 ntBASIC17.33■□□□□ 0.36
FAM200BP0CF97 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 AP001059.3-201ENST00000619053 235 ntBASIC17.33■□□□□ 0.36
FAM200BP0CF97 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.33■□□□□ 0.36
FAM200BP0CF97 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM200BP0CF97 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
FAM200BP0CF97 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.32■□□□□ 0.36
FAM200BP0CF97 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 AL589702.1-201ENST00000641229 1509 ntBASIC17.32■□□□□ 0.36
FAM200BP0CF97 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 HLA-H-201ENST00000383620 1096 ntBASIC17.32■□□□□ 0.36
FAM200BP0CF97 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 AC005052.1-201ENST00000625181 2492 ntBASIC17.32■□□□□ 0.36
FAM200BP0CF97 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM200BP0CF97 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
FAM200BP0CF97 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM200BP0CF97 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 ME2P1-201ENST00000426028 1970 ntBASIC17.31■□□□□ 0.36
FAM200BP0CF97 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.31■□□□□ 0.36
FAM200BP0CF97 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FAM200BP0CF97 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FAM200BP0CF97 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM200BP0CF97 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FAM200BP0CF97 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM200BP0CF97 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms