Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GCK-202ENST00000345378 2421 ntTSL 2 BASIC9.99□□□□□ -0.81
APOBP04114 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
APOBP04114 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
APOBP04114 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
APOBP04114 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
APOBP04114 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
APOBP04114 POM121L10P-201ENST00000436994 1285 ntBASIC9.99□□□□□ -0.81
APOBP04114 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC9.99□□□□□ -0.81
APOBP04114 AC044849.1-201ENST00000519737 1188 ntBASIC9.99□□□□□ -0.81
APOBP04114 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC9.99□□□□□ -0.81
APOBP04114 MBP-227ENST00000526111 581 ntTSL 4 BASIC9.99□□□□□ -0.81
APOBP04114 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
APOBP04114 RN7SL555P-201ENST00000584742 339 ntBASIC9.99□□□□□ -0.81
APOBP04114 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
APOBP04114 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
APOBP04114 AC006453.4-201ENST00000636949 1252 ntBASIC9.99□□□□□ -0.81
APOBP04114 AL138709.1-201ENST00000614840 1693 ntBASIC9.99□□□□□ -0.81
APOBP04114 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
APOBP04114 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
APOBP04114 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 KRT8P35-201ENST00000483942 1338 ntBASIC9.98□□□□□ -0.81
APOBP04114 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 DEF8-202ENST00000418391 852 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 HIST2H2BB-201ENST00000449108 381 ntBASIC9.98□□□□□ -0.81
APOBP04114 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC9.98□□□□□ -0.81
APOBP04114 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 DRD5P1-201ENST00000456605 1438 ntBASIC9.98□□□□□ -0.81
APOBP04114 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 FNTAP2-201ENST00000430308 634 ntBASIC9.98□□□□□ -0.81
APOBP04114 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC9.98□□□□□ -0.81
APOBP04114 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
APOBP04114 AC104982.3-201ENST00000581995 514 ntBASIC9.98□□□□□ -0.81
APOBP04114 NDUFV2P1-201ENST00000596415 907 ntBASIC9.98□□□□□ -0.81
APOBP04114 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC9.98□□□□□ -0.81
APOBP04114 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC9.98□□□□□ -0.81
APOBP04114 AC104784.1-201ENST00000473096 294 ntBASIC9.98□□□□□ -0.81
APOBP04114 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC9.98□□□□□ -0.81
APOBP04114 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC9.98□□□□□ -0.81
APOBP04114 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC9.98□□□□□ -0.81
APOBP04114 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
APOBP04114 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
APOBP04114 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
APOBP04114 AC015818.8-201ENST00000587907 1519 ntBASIC9.97□□□□□ -0.81
APOBP04114 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 TEX30-203ENST00000376022 828 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
APOBP04114 ACTG1P2-201ENST00000415776 1125 ntBASIC9.97□□□□□ -0.81
APOBP04114 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 ACTG1P11-201ENST00000425411 1125 ntBASIC9.97□□□□□ -0.81
APOBP04114 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
APOBP04114 GAPDHP40-201ENST00000505218 1006 ntBASIC9.97□□□□□ -0.81
APOBP04114 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
APOBP04114 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms