Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MT-ND3P03897 AL591424.1-201ENST00000442569 1213 ntBASIC16.76■□□□□ 0.27
MT-ND3P03897 AC092910.1-201ENST00000482027 1129 ntBASIC16.76■□□□□ 0.27
MT-ND3P03897 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.76■□□□□ 0.27
MT-ND3P03897 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.76■□□□□ 0.27
MT-ND3P03897 AL353135.1-201ENST00000606729 504 ntBASIC16.76■□□□□ 0.27
MT-ND3P03897 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 AC079776.2-201ENST00000641154 1609 ntBASIC16.76■□□□□ 0.27
MT-ND3P03897 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ND3P03897 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MT-ND3P03897 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.76■□□□□ 0.27
MT-ND3P03897 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MT-ND3P03897 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 AC104640.1-201ENST00000562617 2109 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.75■□□□□ 0.27
MT-ND3P03897 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 AL031731.1-201ENST00000642131 2094 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 POLD2P1-201ENST00000511220 997 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 AC027601.4-201ENST00000611259 610 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-ND3P03897 FAM197Y3-203ENST00000618346 717 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 AC073592.4-201ENST00000623827 446 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 PGM5P2-202ENST00000637225 1043 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-ND3P03897 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.75■□□□□ 0.27
MT-ND3P03897 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND3P03897 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND3P03897 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.74■□□□□ 0.27
MT-ND3P03897 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 AC104109.2-201ENST00000602919 1418 ntBASIC16.74■□□□□ 0.27
MT-ND3P03897 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms