Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.09■□□□□ 0.49
LGR5O75473 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.09■□□□□ 0.49
LGR5O75473 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LGR5O75473 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LGR5O75473 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 RN7SL618P-201ENST00000477850 296 ntBASIC18.09■□□□□ 0.49
LGR5O75473 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.09■□□□□ 0.49
LGR5O75473 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.09■□□□□ 0.49
LGR5O75473 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.09■□□□□ 0.49
LGR5O75473 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 AC106886.4-201ENST00000623557 2502 ntBASIC18.09■□□□□ 0.49
LGR5O75473 AC018695.7-201ENST00000624587 2492 ntBASIC18.09■□□□□ 0.49
LGR5O75473 AC080080.1-201ENST00000625121 2420 ntBASIC18.09■□□□□ 0.49
LGR5O75473 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
LGR5O75473 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 AL592424.1-201ENST00000563624 1536 ntBASIC18.08■□□□□ 0.49
LGR5O75473 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 BTBD7P1-201ENST00000447253 1453 ntBASIC18.08■□□□□ 0.49
LGR5O75473 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.08■□□□□ 0.49
LGR5O75473 CU639417.3-201ENST00000624240 1404 ntBASIC18.08■□□□□ 0.49
LGR5O75473 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.08■□□□□ 0.49
LGR5O75473 AC022211.2-201ENST00000585075 2527 ntBASIC18.08■□□□□ 0.49
LGR5O75473 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.08■□□□□ 0.49
LGR5O75473 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LGR5O75473 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LGR5O75473 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.08■□□□□ 0.48
LGR5O75473 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.08■□□□□ 0.48
LGR5O75473 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.08■□□□□ 0.48
LGR5O75473 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.08■□□□□ 0.48
LGR5O75473 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.08■□□□□ 0.48
LGR5O75473 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.08■□□□□ 0.48
LGR5O75473 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.08■□□□□ 0.48
LGR5O75473 AL359881.2-201ENST00000602973 570 ntBASIC18.08■□□□□ 0.48
LGR5O75473 AL033527.5-202ENST00000641632 1098 ntBASIC18.08■□□□□ 0.48
LGR5O75473 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LGR5O75473 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
LGR5O75473 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.08■□□□□ 0.48
LGR5O75473 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LGR5O75473 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LGR5O75473 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LGR5O75473 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LGR5O75473 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LGR5O75473 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LGR5O75473 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 KRT17P7-201ENST00000451704 1104 ntBASIC18.07■□□□□ 0.48
LGR5O75473 SERBP1P3-201ENST00000459980 809 ntBASIC18.07■□□□□ 0.48
LGR5O75473 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.07■□□□□ 0.48
LGR5O75473 TP53TG3HP-202ENST00000569755 579 ntBASIC18.07■□□□□ 0.48
LGR5O75473 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
LGR5O75473 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.07■□□□□ 0.48
LGR5O75473 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.07■□□□□ 0.48
LGR5O75473 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LGR5O75473 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LGR5O75473 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.07■□□□□ 0.48
LGR5O75473 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LGR5O75473 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LGR5O75473 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
LGR5O75473 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms