Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.74□□□□□ -0.37
PDE6DO43924 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.74□□□□□ -0.37
PDE6DO43924 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
PDE6DO43924 AL138831.2-201ENST00000606564 490 ntBASIC12.74□□□□□ -0.37
PDE6DO43924 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PDE6DO43924 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PDE6DO43924 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.74□□□□□ -0.37
PDE6DO43924 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.73□□□□□ -0.37
PDE6DO43924 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.73□□□□□ -0.37
PDE6DO43924 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 MIR662-201ENST00000384847 95 ntBASIC12.73□□□□□ -0.37
PDE6DO43924 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.73□□□□□ -0.37
PDE6DO43924 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.73□□□□□ -0.37
PDE6DO43924 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 FAM87A-204ENST00000613235 858 ntBASIC12.73□□□□□ -0.37
PDE6DO43924 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.73□□□□□ -0.37
PDE6DO43924 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 LINC00528-201ENST00000600723 2160 ntBASIC12.73□□□□□ -0.37
PDE6DO43924 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDE6DO43924 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.73□□□□□ -0.37
PDE6DO43924 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.72□□□□□ -0.37
PDE6DO43924 TOP3BP1-201ENST00000420768 1380 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms