Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDELR3O43731 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.55■□□□□ 0.24
KDELR3O43731 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.55■□□□□ 0.24
KDELR3O43731 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KDELR3O43731 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.54■□□□□ 0.24
KDELR3O43731 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 KLF2P3-201ENST00000451977 1087 ntBASIC16.54■□□□□ 0.24
KDELR3O43731 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.54■□□□□ 0.24
KDELR3O43731 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 AC105021.1-202ENST00000570572 669 ntBASIC16.54■□□□□ 0.24
KDELR3O43731 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.54■□□□□ 0.24
KDELR3O43731 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.54■□□□□ 0.24
KDELR3O43731 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
KDELR3O43731 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KDELR3O43731 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.54■□□□□ 0.24
KDELR3O43731 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KDELR3O43731 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KDELR3O43731 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDELR3O43731 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 AL035456.1-201ENST00000456064 1369 ntBASIC16.53■□□□□ 0.24
KDELR3O43731 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.53■□□□□ 0.24
KDELR3O43731 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.53■□□□□ 0.24
KDELR3O43731 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.53■□□□□ 0.24
KDELR3O43731 RFPL4AP1-201ENST00000530883 850 ntBASIC16.53■□□□□ 0.24
KDELR3O43731 BANF1P1-201ENST00000553684 263 ntBASIC16.53■□□□□ 0.24
KDELR3O43731 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 AC026979.3-201ENST00000607315 403 ntBASIC16.53■□□□□ 0.24
KDELR3O43731 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 AL596087.1-201ENST00000400979 1969 ntBASIC16.53■□□□□ 0.24
KDELR3O43731 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.53■□□□□ 0.24
KDELR3O43731 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.53■□□□□ 0.24
KDELR3O43731 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDELR3O43731 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDELR3O43731 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms