Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.3■□□□□ 0.36
TNRC18O15417 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 AC107373.2-201ENST00000607735 490 ntBASIC17.3■□□□□ 0.36
TNRC18O15417 AC074138.1-201ENST00000611182 1303 ntBASIC17.3■□□□□ 0.36
TNRC18O15417 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TNRC18O15417 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TNRC18O15417 CAP2P1-201ENST00000557743 1390 ntBASIC17.3■□□□□ 0.36
TNRC18O15417 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TNRC18O15417 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNRC18O15417 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNRC18O15417 KRT18P64-201ENST00000434946 1219 ntBASIC17.29■□□□□ 0.36
TNRC18O15417 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNRC18O15417 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNRC18O15417 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNRC18O15417 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNRC18O15417 EEF1DP4-201ENST00000446006 880 ntBASIC17.29■□□□□ 0.36
TNRC18O15417 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.29■□□□□ 0.36
TNRC18O15417 TUBB8P8-201ENST00000458717 1058 ntBASIC17.29■□□□□ 0.36
TNRC18O15417 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.29■□□□□ 0.36
TNRC18O15417 AC073413.1-201ENST00000603927 732 ntBASIC17.29■□□□□ 0.36
TNRC18O15417 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.29■□□□□ 0.36
TNRC18O15417 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNRC18O15417 DRD5P1-201ENST00000456605 1438 ntBASIC17.29■□□□□ 0.36
TNRC18O15417 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNRC18O15417 AC011247.3-201ENST00000603297 438 ntBASIC17.28■□□□□ 0.36
TNRC18O15417 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.28■□□□□ 0.36
TNRC18O15417 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.28■□□□□ 0.36
TNRC18O15417 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.28■□□□□ 0.36
TNRC18O15417 SLC25A1P3-201ENST00000395415 828 ntBASIC17.28■□□□□ 0.36
TNRC18O15417 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.28■□□□□ 0.36
TNRC18O15417 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.28■□□□□ 0.36
TNRC18O15417 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 CR392039.1-201ENST00000623217 204 ntBASIC17.28■□□□□ 0.36
TNRC18O15417 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.28■□□□□ 0.36
TNRC18O15417 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
TNRC18O15417 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TNRC18O15417 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.28■□□□□ 0.36
TNRC18O15417 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.28■□□□□ 0.36
TNRC18O15417 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.28■□□□□ 0.36
TNRC18O15417 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TNRC18O15417 AC015910.1-201ENST00000579400 975 ntBASIC17.28■□□□□ 0.36
TNRC18O15417 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.28■□□□□ 0.36
TNRC18O15417 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNRC18O15417 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.27■□□□□ 0.36
TNRC18O15417 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.27■□□□□ 0.36
TNRC18O15417 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNRC18O15417 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TNRC18O15417 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.27■□□□□ 0.36
TNRC18O15417 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNRC18O15417 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNRC18O15417 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNRC18O15417 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNRC18O15417 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNRC18O15417 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TNRC18O15417 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.27■□□□□ 0.36
TNRC18O15417 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.27■□□□□ 0.36
TNRC18O15417 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.27■□□□□ 0.36
TNRC18O15417 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.27■□□□□ 0.36
TNRC18O15417 BNIP3P13-201ENST00000599968 566 ntBASIC17.27■□□□□ 0.36
TNRC18O15417 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.27■□□□□ 0.36
TNRC18O15417 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.27■□□□□ 0.36
TNRC18O15417 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNRC18O15417 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNRC18O15417 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNRC18O15417 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNRC18O15417 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.27■□□□□ 0.35
TNRC18O15417 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TNRC18O15417 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.27■□□□□ 0.35
TNRC18O15417 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TNRC18O15417 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.27■□□□□ 0.35
TNRC18O15417 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNRC18O15417 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNRC18O15417 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNRC18O15417 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNRC18O15417 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNRC18O15417 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNRC18O15417 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNRC18O15417 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.26■□□□□ 0.35
TNRC18O15417 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNRC18O15417 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNRC18O15417 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TNRC18O15417 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms