Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
UPK1AO00322 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK1AO00322 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 RNU1-129P-201ENST00000384064 167 ntBASIC15.54■□□□□ 0.08
UPK1AO00322 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.54■□□□□ 0.08
UPK1AO00322 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK1AO00322 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.54■□□□□ 0.08
UPK1AO00322 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK1AO00322 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.54■□□□□ 0.08
UPK1AO00322 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.54■□□□□ 0.08
UPK1AO00322 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.54■□□□□ 0.08
UPK1AO00322 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.54■□□□□ 0.08
UPK1AO00322 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UPK1AO00322 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.54■□□□□ 0.08
UPK1AO00322 U1.21-201ENST00000580816 167 ntBASIC15.54■□□□□ 0.08
UPK1AO00322 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
UPK1AO00322 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK1AO00322 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1AO00322 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UPK1AO00322 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK1AO00322 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UPK1AO00322 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK1AO00322 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 AC007967.2-201ENST00000432613 625 ntBASIC15.53■□□□□ 0.08
UPK1AO00322 KRT18P2-201ENST00000447938 1258 ntBASIC15.53■□□□□ 0.08
UPK1AO00322 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.53■□□□□ 0.08
UPK1AO00322 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 SLC25A1P1-201ENST00000528351 927 ntBASIC15.53■□□□□ 0.08
UPK1AO00322 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.53■□□□□ 0.08
UPK1AO00322 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK1AO00322 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 AC006058.4-201ENST00000624016 1670 ntBASIC15.53■□□□□ 0.08
UPK1AO00322 LINC02447-202ENST00000501888 2146 ntBASIC15.53■□□□□ 0.08
UPK1AO00322 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UPK1AO00322 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UPK1AO00322 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1AO00322 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1AO00322 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK1AO00322 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UPK1AO00322 REXO1L8P-201ENST00000604378 1897 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 PCGF3-213ENST00000620529 1899 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 ZNF259P1-201ENST00000407656 1365 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.52■□□□□ 0.08
UPK1AO00322 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.52■□□□□ 0.08
UPK1AO00322 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
UPK1AO00322 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
UPK1AO00322 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.52■□□□□ 0.08
UPK1AO00322 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.52■□□□□ 0.08
UPK1AO00322 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms