Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88BA6NKF7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
TMEM88BA6NKF7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AC016700.1-201ENST00000429424 312 ntBASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 EEF1DP6-201ENST00000449232 372 ntBASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 IQSEC3P1-201ENST00000538799 536 ntBASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 PRKXP1-201ENST00000561423 1122 ntBASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 FGFR3P5-201ENST00000564496 886 ntBASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 AC006480.2-201ENST00000609770 1337 ntBASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM88BA6NKF7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 AZGP1P1-201ENST00000411909 902 ntBASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 TARDBPP1-201ENST00000442013 1203 ntBASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 MIR4321-201ENST00000592276 80 ntBASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 AC138649.2-201ENST00000615886 705 ntBASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 AC104581.1-202ENST00000635932 2618 ntBASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88BA6NKF7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms