Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN11AQ9UI33 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN11AQ9UI33 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN11AQ9UI33 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN11AQ9UI33 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 AC104596.2-201ENST00000512793 793 ntBASIC20.68■□□□□ 0.9
SCN11AQ9UI33 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 AC097359.3-201ENST00000603982 1210 ntBASIC20.68■□□□□ 0.9
SCN11AQ9UI33 MIR6775-201ENST00000617557 69 ntBASIC20.68■□□□□ 0.9
SCN11AQ9UI33 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 FLJ38576-201ENST00000623820 2459 ntBASIC20.68■□□□□ 0.9
SCN11AQ9UI33 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN11AQ9UI33 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 FAM86LP-201ENST00000478302 853 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 AL450472.2-201ENST00000603663 1156 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 AC092171.3-201ENST00000610122 2651 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 PHKG1P2-201ENST00000457537 863 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 AC068587.3-201ENST00000526613 355 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 TIMM17BP1-201ENST00000545713 516 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 AC120045.2-201ENST00000567334 178 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 COX11-210ENST00000639671 696 ntBASIC20.67■□□□□ 0.9
SCN11AQ9UI33 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN11AQ9UI33 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 PDIA3P1-201ENST00000471856 1510 ntBASIC20.66■□□□□ 0.9
SCN11AQ9UI33 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 AC022210.1-201ENST00000449856 793 ntBASIC20.66■□□□□ 0.9
SCN11AQ9UI33 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.66■□□□□ 0.9
SCN11AQ9UI33 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN11AQ9UI33 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 AC233724.13-201ENST00000598383 410 ntBASIC20.65■□□□□ 0.9
SCN11AQ9UI33 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SCN11AQ9UI33 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms