Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 AC079328.2-201ENST00000561241 3354 ntBASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 CYP4F24P-201ENST00000586049 1580 ntBASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CHPF2Q9P2E5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AC015922.1-201ENST00000421102 1152 ntBASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 RN7SL618P-201ENST00000477850 296 ntBASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AC004790.1-201ENST00000612686 536 ntBASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AC009118.2-201ENST00000613275 655 ntBASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHPF2Q9P2E5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 AC044860.1-202ENST00000559481 777 ntBASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHPF2Q9P2E5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 SPDYE18-201ENST00000510091 1050 ntBASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 ZNF890P-202ENST00000530367 1156 ntBASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 AL033527.5-202ENST00000641632 1098 ntBASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHPF2Q9P2E5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms