Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 AP005482.1-201ENST00000563722 1273 ntBASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 MYCLP2-201ENST00000449268 967 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 ELK1P1-201ENST00000485699 580 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 FAM8A2P-201ENST00000528813 1142 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 CTBP2P3-201ENST00000585629 1255 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 AC133552.6-201ENST00000613406 534 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 AC005622.1-201ENST00000636801 1703 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 AL133338.1-201ENST00000565695 1517 ntBASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM7Q9NR12 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 SRD5A3P1-201ENST00000603021 949 ntBASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 MIR6775-201ENST00000617557 69 ntBASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM7Q9NR12 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 ME2P1-201ENST00000426028 1970 ntBASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 LTB4R2-202ENST00000528054 3092 ntBASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.15■□□□□ 0.5
PDLIM7Q9NR12 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms