Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 AC025048.6-201ENST00000634326 1161 ntBASIC16.95■□□□□ 0.3
HPS4Q9NQG7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 PCDHB17P-201ENST00000539533 2393 ntBASIC16.95■□□□□ 0.3
HPS4Q9NQG7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 RPL37AP1-201ENST00000412502 279 ntBASIC16.94■□□□□ 0.3
HPS4Q9NQG7 MTND6P24-201ENST00000440466 518 ntBASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AC009407.1-201ENST00000568958 598 ntBASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 RN7SL828P-201ENST00000607615 303 ntBASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AL844908.2-201ENST00000609461 460 ntBASIC16.94■□□□□ 0.3
HPS4Q9NQG7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HPS4Q9NQG7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 AC105021.1-202ENST00000570572 669 ntBASIC16.93■□□□□ 0.3
HPS4Q9NQG7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 AL589739.1-201ENST00000607720 493 ntBASIC16.93■□□□□ 0.3
HPS4Q9NQG7 AC008738.7-201ENST00000609744 511 ntBASIC16.93■□□□□ 0.3
HPS4Q9NQG7 CETN4P-206ENST00000642099 2168 ntBASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms