Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX6-2Q9C056 AC138969.2-201ENST00000532739 9932 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 NEK4P2-201ENST00000580004 1012 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 REXO1L10P-201ENST00000615707 1290 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 REXO1L12P-201ENST00000622156 912 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 AC112504.1-201ENST00000623415 1841 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 DGCR9-201ENST00000609630 2415 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 AC013726.1-201ENST00000563747 2285 ntBASIC13.33□□□□□ -0.28
NKX6-2Q9C056 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX6-2Q9C056 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AC128676.1-201ENST00000454392 318 ntBASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AC024563.2-201ENST00000603282 481 ntBASIC13.32□□□□□ -0.28
NKX6-2Q9C056 AC024243.1-201ENST00000609234 778 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms