Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 AL627231.1-201ENST00000394467 1125 ntBASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 AC023141.7-201ENST00000430646 407 ntBASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 PSMD4P1-201ENST00000433951 1109 ntBASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 AC011247.3-201ENST00000603297 438 ntBASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL25A1Q9BXS0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
COL25A1Q9BXS0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 AC024293.1-201ENST00000467930 498 ntBASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 AC013355.1-201ENST00000562625 723 ntBASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 MIR6858-201ENST00000620733 67 ntBASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 RNF165-205ENST00000588679 2904 ntBASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL25A1Q9BXS0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AL157791.1-201ENST00000553667 1699 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AL021920.2-201ENST00000624828 1351 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 POM121L9P-203ENST00000441984 1285 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AC018463.1-201ENST00000456674 917 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AC026410.1-201ENST00000507366 1101 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AP001582.1-201ENST00000525856 295 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 ECM1P1-201ENST00000604092 1279 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 AC004686.1-201ENST00000605113 538 ntBASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL25A1Q9BXS0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms