Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 C2orf27AP3-201ENST00000434123 579 ntBASIC21.32■■□□□ 1
ABCA3Q99758 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.32■■□□□ 1
ABCA3Q99758 AC004898.1-201ENST00000451057 766 ntBASIC21.32■■□□□ 1
ABCA3Q99758 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.32■■□□□ 1
ABCA3Q99758 RPSAP36-202ENST00000494591 1261 ntBASIC21.32■■□□□ 1
ABCA3Q99758 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC21.32■■□□□ 1
ABCA3Q99758 AC079328.1-201ENST00000560358 952 ntBASIC21.32■■□□□ 1
ABCA3Q99758 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC21.32■■□□□ 1
ABCA3Q99758 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 AL354718.3-201ENST00000616414 581 ntBASIC21.32■■□□□ 1
ABCA3Q99758 CR382287.1-201ENST00000623954 586 ntBASIC21.32■■□□□ 1
ABCA3Q99758 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.32■■□□□ 1
ABCA3Q99758 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.32■■□□□ 1
ABCA3Q99758 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.32■■□□□ 1
ABCA3Q99758 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.32■■□□□ 1
ABCA3Q99758 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.32■■□□□ 1
ABCA3Q99758 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
ABCA3Q99758 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 PP12613-201ENST00000424958 2230 ntBASIC21.31■■□□□ 1
ABCA3Q99758 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.31■■□□□ 1
ABCA3Q99758 DEF8-202ENST00000418391 852 ntTSL 2 BASIC21.31■■□□□ 1
ABCA3Q99758 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC21.31■■□□□ 1
ABCA3Q99758 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC21.31■■□□□ 1
ABCA3Q99758 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 AC097724.1-201ENST00000609581 426 ntBASIC21.31■■□□□ 1
ABCA3Q99758 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 AL390961.4-201ENST00000623958 2535 ntBASIC21.31■■□□□ 1
ABCA3Q99758 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ABCA3Q99758 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.31■■□□□ 1
ABCA3Q99758 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCA3Q99758 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 CSH2-202ENST00000345366 598 ntTSL 5 BASIC21.3■■□□□ 1
ABCA3Q99758 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCA3Q99758 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.3■■□□□ 1
ABCA3Q99758 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.3■■□□□ 1
ABCA3Q99758 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 MIR6727-201ENST00000620702 65 ntBASIC21.3■■□□□ 1
ABCA3Q99758 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.3■■□□□ 1
ABCA3Q99758 AL592424.1-201ENST00000563624 1536 ntBASIC21.3■■□□□ 1
ABCA3Q99758 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.3■■□□□ 1
ABCA3Q99758 HLA-A-202ENST00000376806 1854 ntBASIC21.3■■□□□ 1
ABCA3Q99758 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ABCA3Q99758 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCA3Q99758 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.3■■□□□ 1
ABCA3Q99758 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ABCA3Q99758 AL138709.1-201ENST00000614840 1693 ntBASIC21.3■■□□□ 1
ABCA3Q99758 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.29■■□□□ 1
ABCA3Q99758 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 MIR1202-201ENST00000408529 83 ntBASIC21.29■■□□□ 1
ABCA3Q99758 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC21.29■■□□□ 1
ABCA3Q99758 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC21.29■■□□□ 1
ABCA3Q99758 FAM197Y7-201ENST00000432892 766 ntBASIC21.29■■□□□ 1
ABCA3Q99758 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 UPF3AP2-201ENST00000457924 1132 ntBASIC21.29■■□□□ 1
ABCA3Q99758 AP001258.2-201ENST00000529891 490 ntBASIC21.29■■□□□ 1
ABCA3Q99758 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.29■■□□□ 1
ABCA3Q99758 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ABCA3Q99758 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC21.29■■□□□ 1
ABCA3Q99758 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ABCA3Q99758 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.29■■□□□ 1
ABCA3Q99758 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.29■■□□□ 1
ABCA3Q99758 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 DRD5P1-201ENST00000456605 1438 ntBASIC21.29■■□□□ 1
ABCA3Q99758 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ABCA3Q99758 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.29■■□□□ 1
ABCA3Q99758 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC21.29■■□□□ 1
ABCA3Q99758 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.29■■□□□ 1
ABCA3Q99758 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms