Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 RNF152P1-201ENST00000397754 604 ntBASIC14.14□□□□□ -0.15
CMTM3Q96MX0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 PRYP5-201ENST00000451909 266 ntBASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 AC005089.1-201ENST00000619486 2241 ntBASIC14.14□□□□□ -0.15
CMTM3Q96MX0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AC005622.1-201ENST00000636801 1703 ntBASIC14.13□□□□□ -0.15
CMTM3Q96MX0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 CICP24-201ENST00000605464 2705 ntBASIC14.13□□□□□ -0.15
CMTM3Q96MX0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AL645929.1-201ENST00000420084 975 ntBASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AC117947.1-201ENST00000427448 529 ntBASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CMTM3Q96MX0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AC011477.6-201ENST00000604980 1927 ntBASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 KRT8P26-201ENST00000534154 1276 ntBASIC14.12□□□□□ -0.15
CMTM3Q96MX0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms