Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 AC009093.7-201ENST00000623853 1223 ntBASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTHRC1Q96CG8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 KRT18P32-201ENST00000424695 1287 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 DNAJB3-202ENST00000449667 1266 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC023141.5-201ENST00000458585 616 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC092183.1-201ENST00000469884 875 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 RARRES2P9-201ENST00000565168 469 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC069224.1-201ENST00000566372 1715 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC018695.7-201ENST00000624587 2492 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AC079781.4-201ENST00000641908 219 ntBASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.13■□□□□ 0.01
CTHRC1Q96CG8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 CDC14C-201ENST00000428251 1719 ntBASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 AL365203.3-201ENST00000609742 2057 ntBASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 HAUS4P1-201ENST00000406739 1145 ntBASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 CNN2P11-201ENST00000429351 262 ntBASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 RNA5SP410-201ENST00000516285 106 ntBASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 ALG1L8P-201ENST00000533887 760 ntBASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTHRC1Q96CG8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms