Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRUNE2Q8WUY3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 RPSAP36-202ENST00000494591 1261 ntBASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 AL353726.2-201ENST00000623259 884 ntBASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 CU633904.3-201ENST00000624042 1029 ntBASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PRUNE2Q8WUY3 AL021920.2-201ENST00000624828 1351 ntBASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 RN7SL11P-201ENST00000471305 293 ntBASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRUNE2Q8WUY3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 AC006001.1-201ENST00000325130 474 ntBASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PRUNE2Q8WUY3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 AL645939.5-201ENST00000606834 243 ntBASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 AC015818.8-201ENST00000587907 1519 ntBASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRUNE2Q8WUY3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms