Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM21FP-201ENST00000426241 1131 ntBASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 ACTBP11-201ENST00000436287 1126 ntBASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 AP001889.1-201ENST00000525414 633 ntBASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 AP000812.2-201ENST00000538934 718 ntBASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 AC097359.3-201ENST00000603982 1210 ntBASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 REXO1L8P-201ENST00000604378 1897 ntBASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AL355864.2-201ENST00000447420 863 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 VDAC1P7-201ENST00000462417 847 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 C2orf69P2-201ENST00000562032 1123 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 CLUHP6-201ENST00000580789 941 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AL133338.1-201ENST00000565695 1517 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC020907.1-201ENST00000616460 1350 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC134915.1-201ENST00000426461 574 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC022137.2-201ENST00000503482 481 ntBASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL27A1Q8IZC6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 AL121723.1-201ENST00000445194 1519 ntBASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 BCRP2-202ENST00000447763 634 ntBASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 BCRP6-201ENST00000510112 632 ntBASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 BCRP7-201ENST00000511549 544 ntBASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 AC244093.1-201ENST00000610837 814 ntBASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.11■□□□□ 0.01
COL27A1Q8IZC6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms