Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AC024909.3-201ENST00000611513 2257 ntBASIC14.34□□□□□ -0.11
HIST1H3AP68431 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.33□□□□□ -0.11
HIST1H3AP68431 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H3AP68431 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H3AP68431 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.33□□□□□ -0.11
HIST1H3AP68431 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H3AP68431 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H3AP68431 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H3AP68431 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H3AP68431 AC079328.2-201ENST00000561241 3354 ntBASIC14.33□□□□□ -0.11
HIST1H3AP68431 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AC073439.1-201ENST00000624121 1774 ntBASIC14.33□□□□□ -0.12
HIST1H3AP68431 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AC099522.2-201ENST00000607001 744 ntBASIC14.33□□□□□ -0.12
HIST1H3AP68431 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H3AP68431 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H3AP68431 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AC112191.1-201ENST00000523689 701 ntBASIC14.32□□□□□ -0.12
HIST1H3AP68431 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms