Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RIPK4P57078 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RIPK4P57078 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RIPK4P57078 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.38■■□□□ 1.01
RIPK4P57078 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 AC125807.1-201ENST00000483097 614 ntBASIC21.38■■□□□ 1.01
RIPK4P57078 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.38■■□□□ 1.01
RIPK4P57078 AL355385.1-201ENST00000606123 409 ntBASIC21.38■■□□□ 1.01
RIPK4P57078 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.38■■□□□ 1.01
RIPK4P57078 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
RIPK4P57078 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK4P57078 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.37■■□□□ 1.01
RIPK4P57078 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RIPK4P57078 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK4P57078 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RIPK4P57078 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
RIPK4P57078 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.37■■□□□ 1.01
RIPK4P57078 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK4P57078 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.37■■□□□ 1.01
RIPK4P57078 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.37■■□□□ 1.01
RIPK4P57078 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 MIR4321-201ENST00000592276 80 ntBASIC21.37■■□□□ 1.01
RIPK4P57078 AL390955.2-201ENST00000603032 514 ntBASIC21.37■■□□□ 1.01
RIPK4P57078 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK4P57078 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK4P57078 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK4P57078 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
RIPK4P57078 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.36■■□□□ 1.01
RIPK4P57078 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.36■■□□□ 1.01
RIPK4P57078 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.36■■□□□ 1.01
RIPK4P57078 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.36■■□□□ 1.01
RIPK4P57078 AC107890.1-201ENST00000422478 521 ntBASIC21.36■■□□□ 1.01
RIPK4P57078 AL353705.2-201ENST00000428243 662 ntBASIC21.36■■□□□ 1.01
RIPK4P57078 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.36■■□□□ 1.01
RIPK4P57078 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 AC140878.1-201ENST00000565277 250 ntBASIC21.36■■□□□ 1.01
RIPK4P57078 AC105021.1-202ENST00000570572 669 ntBASIC21.36■■□□□ 1.01
RIPK4P57078 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.36■■□□□ 1.01
RIPK4P57078 AL365330.1-201ENST00000607459 531 ntBASIC21.36■■□□□ 1.01
RIPK4P57078 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.36■■□□□ 1.01
RIPK4P57078 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RIPK4P57078 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK4P57078 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RIPK4P57078 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK4P57078 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RIPK4P57078 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK4P57078 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RIPK4P57078 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.35■■□□□ 1.01
RIPK4P57078 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms