Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SUMO3P55854 KRT18P32-201ENST00000424695 1287 ntBASIC14.82□□□□□ -0.04
SUMO3P55854 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.82□□□□□ -0.04
SUMO3P55854 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.82□□□□□ -0.04
SUMO3P55854 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.82□□□□□ -0.04
SUMO3P55854 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.82□□□□□ -0.04
SUMO3P55854 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.82□□□□□ -0.04
SUMO3P55854 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.82□□□□□ -0.04
SUMO3P55854 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.82□□□□□ -0.04
SUMO3P55854 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.82□□□□□ -0.04
SUMO3P55854 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.82□□□□□ -0.04
SUMO3P55854 AC079781.4-201ENST00000641908 219 ntBASIC14.82□□□□□ -0.04
SUMO3P55854 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SUMO3P55854 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SUMO3P55854 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.82□□□□□ -0.04
SUMO3P55854 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.82□□□□□ -0.04
SUMO3P55854 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
SUMO3P55854 AL513523.2-202ENST00000427283 2040 ntBASIC14.82□□□□□ -0.04
SUMO3P55854 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SUMO3P55854 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SUMO3P55854 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SUMO3P55854 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.81□□□□□ -0.04
SUMO3P55854 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.81□□□□□ -0.04
SUMO3P55854 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.81□□□□□ -0.04
SUMO3P55854 SLC25A39P2-201ENST00000537614 270 ntBASIC14.81□□□□□ -0.04
SUMO3P55854 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.81□□□□□ -0.04
SUMO3P55854 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.81□□□□□ -0.04
SUMO3P55854 AC134684.3-201ENST00000641758 218 ntBASIC14.81□□□□□ -0.04
SUMO3P55854 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SUMO3P55854 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.81□□□□□ -0.04
SUMO3P55854 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SUMO3P55854 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 HAUS4P1-201ENST00000406739 1145 ntBASIC14.8□□□□□ -0.04
SUMO3P55854 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 AC023141.5-201ENST00000458585 616 ntBASIC14.8□□□□□ -0.04
SUMO3P55854 RNA5SP410-201ENST00000516285 106 ntBASIC14.8□□□□□ -0.04
SUMO3P55854 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.8□□□□□ -0.04
SUMO3P55854 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
SUMO3P55854 AC061975.2-201ENST00000581722 295 ntBASIC14.8□□□□□ -0.04
SUMO3P55854 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms