Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 AC069262.1-201ENST00000539058 672 ntBASIC17.89■□□□□ 0.45
NCKAP1LP55160 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKAP1LP55160 PCDH8P1-201ENST00000428983 2773 ntBASIC17.89■□□□□ 0.45
NCKAP1LP55160 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.89■□□□□ 0.45
NCKAP1LP55160 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 AC093028.1-201ENST00000622998 982 ntBASIC17.88■□□□□ 0.45
NCKAP1LP55160 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NCKAP1LP55160 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCKAP1LP55160 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 SPDYE7P-202ENST00000420373 878 ntBASIC17.87■□□□□ 0.45
NCKAP1LP55160 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 BANF1P1-201ENST00000553684 263 ntBASIC17.87■□□□□ 0.45
NCKAP1LP55160 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 AC015911.4-201ENST00000588022 1070 ntBASIC17.87■□□□□ 0.45
NCKAP1LP55160 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 AC008677.1-201ENST00000519230 1561 ntBASIC17.87■□□□□ 0.45
NCKAP1LP55160 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.87■□□□□ 0.45
NCKAP1LP55160 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCKAP1LP55160 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NCKAP1LP55160 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKAP1LP55160 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms