Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.34■□□□□ 0.21
NUBP1P53384 BCRP2-202ENST00000447763 634 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC16.34■□□□□ 0.21
NUBP1P53384 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.34■□□□□ 0.21
NUBP1P53384 RPL13AP20-201ENST00000459725 609 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC16.34■□□□□ 0.21
NUBP1P53384 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.34■□□□□ 0.21
NUBP1P53384 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.34■□□□□ 0.21
NUBP1P53384 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC16.34■□□□□ 0.21
NUBP1P53384 BCRP6-201ENST00000510112 632 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 BCRP7-201ENST00000511549 544 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.34■□□□□ 0.21
NUBP1P53384 AC243972.2-201ENST00000541653 991 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC16.34■□□□□ 0.21
NUBP1P53384 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 VN1R87P-201ENST00000596706 487 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 AC092474.3-201ENST00000603022 568 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.34■□□□□ 0.21
NUBP1P53384 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC16.34■□□□□ 0.21
NUBP1P53384 AC008687.7-202ENST00000637404 953 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 CROCCP3-202ENST00000420820 1947 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC16.34■□□□□ 0.21
NUBP1P53384 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.34■□□□□ 0.21
NUBP1P53384 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.34■□□□□ 0.21
NUBP1P53384 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NUBP1P53384 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NUBP1P53384 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.34■□□□□ 0.21
NUBP1P53384 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC16.34■□□□□ 0.21
NUBP1P53384 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUBP1P53384 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUBP1P53384 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUBP1P53384 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUBP1P53384 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.33■□□□□ 0.21
NUBP1P53384 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.33■□□□□ 0.21
NUBP1P53384 AP000997.3-201ENST00000623333 2250 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 RNU6-233P-201ENST00000410845 141 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC16.33■□□□□ 0.2
NUBP1P53384 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.33■□□□□ 0.2
NUBP1P53384 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.33■□□□□ 0.2
NUBP1P53384 AKR7A2P1-201ENST00000460134 915 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 PRELID3BP7-201ENST00000503606 469 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 AC068587.3-201ENST00000526613 355 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC16.33■□□□□ 0.2
NUBP1P53384 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 AC022306.3-201ENST00000619930 550 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 AC091046.2-201ENST00000620775 665 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 AC138028.6-201ENST00000616106 1482 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 AC138932.1-201ENST00000534164 6830 ntBASIC16.33■□□□□ 0.2
NUBP1P53384 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NUBP1P53384 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.33■□□□□ 0.2
NUBP1P53384 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUBP1P53384 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NUBP1P53384 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms