Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 LINC00895-201ENST00000629028 1637 ntBASIC19.2■□□□□ 0.66
MRE11P49959 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MRE11P49959 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.2■□□□□ 0.66
MRE11P49959 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 AC005089.1-201ENST00000619486 2241 ntBASIC19.2■□□□□ 0.66
MRE11P49959 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MRE11P49959 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 CDC14C-201ENST00000428251 1719 ntBASIC19.2■□□□□ 0.66
MRE11P49959 SSR4P1-203ENST00000599569 2260 ntBASIC19.2■□□□□ 0.66
MRE11P49959 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
MRE11P49959 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MRE11P49959 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.19■□□□□ 0.66
MRE11P49959 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.19■□□□□ 0.66
MRE11P49959 IGHV3-52-201ENST00000519770 353 ntBASIC19.19■□□□□ 0.66
MRE11P49959 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.19■□□□□ 0.66
MRE11P49959 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MRE11P49959 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 LINC02447-202ENST00000501888 2146 ntBASIC19.19■□□□□ 0.66
MRE11P49959 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.19■□□□□ 0.66
MRE11P49959 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.19■□□□□ 0.66
MRE11P49959 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRE11P49959 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MRE11P49959 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.18■□□□□ 0.66
MRE11P49959 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.18■□□□□ 0.66
MRE11P49959 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 AC007292.2-201ENST00000593524 1812 ntBASIC19.18■□□□□ 0.66
MRE11P49959 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.18■□□□□ 0.66
MRE11P49959 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 COX5BP2-201ENST00000392354 334 ntBASIC19.18■□□□□ 0.66
MRE11P49959 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 DRAXINP1-201ENST00000437611 948 ntBASIC19.18■□□□□ 0.66
MRE11P49959 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.18■□□□□ 0.66
MRE11P49959 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.18■□□□□ 0.66
MRE11P49959 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.18■□□□□ 0.66
MRE11P49959 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.18■□□□□ 0.66
MRE11P49959 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
MRE11P49959 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC19.18■□□□□ 0.66
MRE11P49959 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.18■□□□□ 0.66
MRE11P49959 AC106881.1-201ENST00000605849 3329 ntBASIC19.18■□□□□ 0.66
MRE11P49959 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRE11P49959 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.18■□□□□ 0.66
MRE11P49959 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MRE11P49959 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MRE11P49959 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC19.17■□□□□ 0.66
MRE11P49959 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRE11P49959 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.17■□□□□ 0.66
MRE11P49959 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.17■□□□□ 0.66
MRE11P49959 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms