Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SSR1P43307 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.53■□□□□ 0.4
SSR1P43307 AC107918.2-201ENST00000530817 355 ntBASIC17.53■□□□□ 0.4
SSR1P43307 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 AC012640.2-201ENST00000561606 901 ntBASIC17.53■□□□□ 0.4
SSR1P43307 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 MIR4492-201ENST00000581627 80 ntBASIC17.53■□□□□ 0.4
SSR1P43307 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.53■□□□□ 0.4
SSR1P43307 CYP2A7P1-201ENST00000595391 815 ntBASIC17.53■□□□□ 0.4
SSR1P43307 AC008667.4-201ENST00000607370 168 ntBASIC17.53■□□□□ 0.4
SSR1P43307 AP001350.2-201ENST00000625104 1094 ntBASIC17.53■□□□□ 0.4
SSR1P43307 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SSR1P43307 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 KRT8P39-201ENST00000396270 1433 ntBASIC17.53■□□□□ 0.4
SSR1P43307 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 SNX33P1-201ENST00000592116 1762 ntBASIC17.53■□□□□ 0.4
SSR1P43307 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.53■□□□□ 0.4
SSR1P43307 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 AL512652.2-201ENST00000625156 1716 ntBASIC17.52■□□□□ 0.4
SSR1P43307 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.52■□□□□ 0.4
SSR1P43307 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.52■□□□□ 0.4
SSR1P43307 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SSR1P43307 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SSR1P43307 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 AL122018.1-201ENST00000446607 2310 ntBASIC17.52■□□□□ 0.4
SSR1P43307 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SSR1P43307 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.52■□□□□ 0.4
SSR1P43307 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.52■□□□□ 0.4
SSR1P43307 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSR1P43307 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.52■□□□□ 0.4
SSR1P43307 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSR1P43307 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSR1P43307 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.52■□□□□ 0.39
SSR1P43307 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSR1P43307 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SSR1P43307 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.39
SSR1P43307 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.52■□□□□ 0.39
SSR1P43307 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSR1P43307 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.52■□□□□ 0.39
SSR1P43307 GGT3P-204ENST00000453783 1664 ntBASIC17.52■□□□□ 0.39
SSR1P43307 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 AC129492.6-201ENST00000611383 1305 ntBASIC17.51■□□□□ 0.39
SSR1P43307 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.51■□□□□ 0.39
SSR1P43307 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 MRPL20P1-201ENST00000400819 433 ntBASIC17.51■□□□□ 0.39
SSR1P43307 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.51■□□□□ 0.39
SSR1P43307 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.51■□□□□ 0.39
SSR1P43307 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.51■□□□□ 0.39
SSR1P43307 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 AC018712.1-201ENST00000455767 687 ntBASIC17.51■□□□□ 0.39
SSR1P43307 AC092910.1-201ENST00000482027 1129 ntBASIC17.51■□□□□ 0.39
SSR1P43307 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 AC087641.1-201ENST00000557561 1021 ntBASIC17.51■□□□□ 0.39
SSR1P43307 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSR1P43307 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.51■□□□□ 0.39
SSR1P43307 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.51■□□□□ 0.39
SSR1P43307 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.51■□□□□ 0.39
SSR1P43307 AL691432.3-201ENST00000621860 400 ntBASIC17.51■□□□□ 0.39
SSR1P43307 AC004790.2-201ENST00000623588 572 ntBASIC17.51■□□□□ 0.39
SSR1P43307 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms