Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPHP41219 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRPHP41219 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPHP41219 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRPHP41219 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPHP41219 MIR648-201ENST00000385046 94 ntBASIC18.5■□□□□ 0.55
PRPHP41219 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRPHP41219 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPHP41219 HTR5BP-201ENST00000430851 1154 ntBASIC18.5■□□□□ 0.55
PRPHP41219 DNAJB3-201ENST00000446806 729 ntBASIC18.5■□□□□ 0.55
PRPHP41219 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.5■□□□□ 0.55
PRPHP41219 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPHP41219 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPHP41219 AC105233.2-201ENST00000523697 349 ntBASIC18.5■□□□□ 0.55
PRPHP41219 AF228730.5-201ENST00000530288 346 ntBASIC18.5■□□□□ 0.55
PRPHP41219 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPHP41219 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPHP41219 AC243562.1-201ENST00000560672 389 ntBASIC18.5■□□□□ 0.55
PRPHP41219 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPHP41219 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPHP41219 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPHP41219 AC026120.1-201ENST00000611536 926 ntBASIC18.5■□□□□ 0.55
PRPHP41219 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPHP41219 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPHP41219 AC079328.2-201ENST00000561241 3354 ntBASIC18.5■□□□□ 0.55
PRPHP41219 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.5■□□□□ 0.55
PRPHP41219 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRPHP41219 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.5■□□□□ 0.55
PRPHP41219 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PRPHP41219 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.5■□□□□ 0.55
PRPHP41219 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRPHP41219 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 ALG1L5P-201ENST00000482043 771 ntBASIC18.49■□□□□ 0.55
PRPHP41219 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
PRPHP41219 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.49■□□□□ 0.55
PRPHP41219 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPHP41219 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.49■□□□□ 0.55
PRPHP41219 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPHP41219 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PRPHP41219 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRPHP41219 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 AC245100.5-201ENST00000452108 331 ntBASIC18.48■□□□□ 0.55
PRPHP41219 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.48■□□□□ 0.55
PRPHP41219 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.48■□□□□ 0.55
PRPHP41219 YBX1P5-201ENST00000509441 847 ntBASIC18.48■□□□□ 0.55
PRPHP41219 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.48■□□□□ 0.55
PRPHP41219 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.48■□□□□ 0.55
PRPHP41219 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.48■□□□□ 0.55
PRPHP41219 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.48■□□□□ 0.55
PRPHP41219 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPHP41219 FOXO1B-201ENST00000504678 1527 ntBASIC18.48■□□□□ 0.55
PRPHP41219 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.48■□□□□ 0.55
PRPHP41219 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRPHP41219 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms